species:   Comil
pid:       PID1161
parent:    milR29
paralog:   
locus:     NW_006271974.1:2987370-2987506
matures:   ['AGGACGUUGGCGUGCUGUUCG', 'GACGGCCGUGUCUACGUCCUGG']
srr:       SRR8054058
genome:    /Users/jax/+Genomes/Fungal_genomes/Comil.GCF_000225605.1_CmilitarisCM01_v01_genomic.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Shao2019-xf.SRR8054058.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Shao2019-xf.SRR8054058.cram NW_006271974.1:2987370-2987506

1 out of bounds
0 alignments
0 proper strand
0 stranded perfect matches

      *************************                                                                              **********************      
CGAGGACGUUGGCGUGCUGUUCGACGAGGUCGGCCAGCUUGUGCAUGAGGACGCUGCGCUCGCGGCCGGCGCAGUCGGCCCACGAGGGGUCCUCAAAGGCGGCGCGGGCGGCCUUGACGGCCGUGUCUACGUCCUGG
(.(((((((..(((.(((((....((((((((.((.((((((...(((((((.(....((((.(((((((...)))))))..))))).)))))))...)))).)))).))))))))))))))))....))))))).)
--AGGACGUUGGCGUGCUGUUCG------------------------------------------------------------------------------------------------------------------ l=21 a=0 c
-------------------------------------------------------------------------------------------------------------------GACGGCCGUGUCUACGUCCUGG l=22 a=0 c*
--AGGACGUUGGCGUGCUGUUCG------------------------------------------------------------------------------------------------------------------ l=21 a=0 ma
-------------------------------------------------------------------------------------------------------------------GACGGCCGUGUCUACGUCCUGG l=22 a=0 ma*


No alignments to locus

mb-00011
ax-1001011
ku-01
ss-000110001100
fn-001
